Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 AL592076.1-201ENST00000424448 303 ntBASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 XBP1P1-201ENST00000436573 652 ntBASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 DDX39AP1-201ENST00000445147 1181 ntBASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 AC027139.1-201ENST00000565286 951 ntBASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 DGAT2L7P-201ENST00000602462 744 ntBASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 NAMA-206ENST00000605377 509 ntTSL 5 BASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 LINC00431-202ENST00000636375 159 ntBASIC20.13■□□□□ 0.81
COL22A1Q8NFW1 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 STK16-203ENST00000409516 895 ntTSL 2 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 AC006158.1-201ENST00000610661 249 ntBASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
COL22A1Q8NFW1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 ACTBP7-201ENST00000418351 1124 ntBASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 AP000911.2-201ENST00000534330 502 ntBASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC20.11■□□□□ 0.81
COL22A1Q8NFW1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 MIR4472-1-201ENST00000584349 80 ntBASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 AC144522.1-201ENST00000625111 1658 ntBASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 REXO1L4P-201ENST00000605109 1937 ntBASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC20.1■□□□□ 0.81
COL22A1Q8NFW1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 BANF1P3-201ENST00000412556 261 ntBASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 AC009560.1-201ENST00000620208 434 ntBASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.09■□□□□ 0.81
COL22A1Q8NFW1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms