Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 AC023024.2-201ENST00000623561 1993 ntBASIC14.62□□□□□ -0.07
NUP43Q8NFH3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.62□□□□□ -0.07
NUP43Q8NFH3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AL161772.1-201ENST00000610494 4412 ntBASIC14.61□□□□□ -0.07
NUP43Q8NFH3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AC100757.3-201ENST00000622361 1406 ntBASIC14.61□□□□□ -0.07
NUP43Q8NFH3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AC015922.1-201ENST00000421102 1152 ntBASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AC015910.1-201ENST00000579400 975 ntBASIC14.61□□□□□ -0.07
NUP43Q8NFH3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
NUP43Q8NFH3 AC091951.1-201ENST00000512854 2465 ntBASIC14.6□□□□□ -0.07
NUP43Q8NFH3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 RPL13P2-201ENST00000440687 659 ntBASIC14.6□□□□□ -0.07
NUP43Q8NFH3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 DUX4L27-201ENST00000554796 1261 ntBASIC14.6□□□□□ -0.07
NUP43Q8NFH3 AC044860.1-202ENST00000559481 777 ntBASIC14.6□□□□□ -0.07
NUP43Q8NFH3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 AL590560.3-201ENST00000623350 461 ntBASIC14.6□□□□□ -0.07
NUP43Q8NFH3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms