Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 WASH3P-207ENST00000560956 1394 ntBASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 FO538757.1-201ENST00000623083 1397 ntBASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 FAM8A3P-201ENST00000427218 844 ntBASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 FAM58DP-201ENST00000428076 619 ntBASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 AC084121.4-201ENST00000641598 221 ntBASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 AF228730.8-201ENST00000642140 221 ntBASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN22Q8N7P3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 PCDHA3-202ENST00000532566 4594 ntBASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 AC093520.2-201ENST00000561830 333 ntBASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN22Q8N7P3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AC126755.1-201ENST00000525846 6405 ntBASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN22Q8N7P3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms