Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.08□□□□□ -0.32
C11orf42Q8N5U0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
C11orf42Q8N5U0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 MRPS18AP1-201ENST00000414458 589 ntBASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 AL450472.2-201ENST00000603663 1156 ntBASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.07□□□□□ -0.32
C11orf42Q8N5U0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 AP005117.1-202ENST00000581724 1908 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 BASP1P1-201ENST00000430708 665 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 SERBP1P3-201ENST00000459980 809 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 AC093214.1-201ENST00000511688 1107 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 HNRNPUP1-201ENST00000554987 333 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 MIR4313-201ENST00000580760 101 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 AC025048.3-201ENST00000590609 569 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 AC005702.4-201ENST00000618393 416 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 Z97205.2-201ENST00000564697 1639 ntBASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
C11orf42Q8N5U0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
C11orf42Q8N5U0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms