Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.88■□□□□ 0.13
CHPFQ8IZ52 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.88■□□□□ 0.13
CHPFQ8IZ52 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 AC103702.1-201ENST00000548801 2630 ntBASIC15.87■□□□□ 0.13
CHPFQ8IZ52 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 AC007551.1-201ENST00000457394 519 ntBASIC15.87■□□□□ 0.13
CHPFQ8IZ52 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 AC005252.2-201ENST00000624630 1141 ntBASIC15.87■□□□□ 0.13
CHPFQ8IZ52 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CHPFQ8IZ52 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 MSTO2P-201ENST00000314835 1709 ntBASIC15.86■□□□□ 0.13
CHPFQ8IZ52 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AC012441.1-201ENST00000446669 685 ntBASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AC093433.1-201ENST00000458048 571 ntBASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.86■□□□□ 0.13
CHPFQ8IZ52 AL596087.1-201ENST00000400979 1969 ntBASIC15.86■□□□□ 0.13
CHPFQ8IZ52 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CHPFQ8IZ52 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms