Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
APLFQ8IW19 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
APLFQ8IW19 PCDHA3-202ENST00000532566 4594 ntBASIC15.58■□□□□ 0.09
APLFQ8IW19 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
APLFQ8IW19 AC006504.5-208ENST00000588784 2401 ntBASIC15.58■□□□□ 0.09
APLFQ8IW19 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
APLFQ8IW19 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
APLFQ8IW19 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
APLFQ8IW19 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.58■□□□□ 0.08
APLFQ8IW19 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
APLFQ8IW19 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 MIR346-201ENST00000362234 95 ntBASIC15.58■□□□□ 0.08
APLFQ8IW19 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.58■□□□□ 0.08
APLFQ8IW19 RNU1-129P-201ENST00000384064 167 ntBASIC15.58■□□□□ 0.08
APLFQ8IW19 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
APLFQ8IW19 AL512638.1-201ENST00000457493 794 ntBASIC15.58■□□□□ 0.08
APLFQ8IW19 ALG1L8P-201ENST00000533887 760 ntBASIC15.58■□□□□ 0.08
APLFQ8IW19 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.58■□□□□ 0.08
APLFQ8IW19 AC005225.4-201ENST00000557330 545 ntBASIC15.58■□□□□ 0.08
APLFQ8IW19 U1.21-201ENST00000580816 167 ntBASIC15.58■□□□□ 0.08
APLFQ8IW19 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.58■□□□□ 0.08
APLFQ8IW19 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 AC008761.3-201ENST00000624803 892 ntBASIC15.58■□□□□ 0.08
APLFQ8IW19 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.58■□□□□ 0.08
APLFQ8IW19 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
APLFQ8IW19 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.58■□□□□ 0.08
APLFQ8IW19 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.58■□□□□ 0.08
APLFQ8IW19 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
APLFQ8IW19 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
APLFQ8IW19 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
APLFQ8IW19 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 MIR661-201ENST00000384842 89 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.57■□□□□ 0.08
APLFQ8IW19 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 UGT1A2P-201ENST00000454886 866 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.57■□□□□ 0.08
APLFQ8IW19 IGHV3-42-201ENST00000520410 361 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.57■□□□□ 0.08
APLFQ8IW19 AP000842.3-202ENST00000569238 1080 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 LINC02560-201ENST00000596379 459 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 AL031055.1-201ENST00000606362 631 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 AC012645.4-201ENST00000610691 1061 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 MIR6080-201ENST00000617359 66 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 AL390754.1-201ENST00000619088 582 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
APLFQ8IW19 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
APLFQ8IW19 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.57■□□□□ 0.08
APLFQ8IW19 AC079781.5-202ENST00000641784 3743 ntBASIC15.57■□□□□ 0.08
APLFQ8IW19 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.57■□□□□ 0.08
APLFQ8IW19 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
APLFQ8IW19 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
APLFQ8IW19 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
APLFQ8IW19 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms