Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF135Q8IUD6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 FAM86LP-201ENST00000478302 853 ntBASIC16.56■□□□□ 0.24
RNF135Q8IUD6 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 AC244669.2-201ENST00000612320 853 ntBASIC16.56■□□□□ 0.24
RNF135Q8IUD6 AC244452.3-201ENST00000636814 210 ntBASIC16.56■□□□□ 0.24
RNF135Q8IUD6 AC008687.7-202ENST00000637404 953 ntBASIC16.56■□□□□ 0.24
RNF135Q8IUD6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 AL513523.2-202ENST00000427283 2040 ntBASIC16.56■□□□□ 0.24
RNF135Q8IUD6 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 AC046158.3-201ENST00000624947 2558 ntBASIC16.56■□□□□ 0.24
RNF135Q8IUD6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF135Q8IUD6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 AL607033.1-201ENST00000623900 1599 ntBASIC16.55■□□□□ 0.24
RNF135Q8IUD6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 BAATP1-201ENST00000412284 1225 ntBASIC16.55■□□□□ 0.24
RNF135Q8IUD6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 AKR7A2P1-201ENST00000460134 915 ntBASIC16.55■□□□□ 0.24
RNF135Q8IUD6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 Z97205.2-201ENST00000564697 1639 ntBASIC16.55■□□□□ 0.24
RNF135Q8IUD6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 HYMAI-201ENST00000635591 3347 ntBASIC16.55■□□□□ 0.24
RNF135Q8IUD6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF135Q8IUD6 NORAD-201ENST00000565493 5339 ntBASIC16.55■□□□□ 0.24
RNF135Q8IUD6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 U82695.1-201ENST00000635752 1889 ntBASIC16.54■□□□□ 0.24
RNF135Q8IUD6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF135Q8IUD6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms