Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 AC002472.2-201ENST00000442739 958 ntBASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 TIMM17BP1-201ENST00000545713 516 ntBASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 MIR4745-201ENST00000577608 62 ntBASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 LINC02560-201ENST00000596379 459 ntBASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB11FIP4Q86YS3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 BTBD7P1-201ENST00000447253 1453 ntBASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 AC092337.1-201ENST00000568699 1129 ntBASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 TMBIM7P-203ENST00000641617 1718 ntBASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB11FIP4Q86YS3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB11FIP4Q86YS3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms