Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VRK2Q86Y07 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VRK2Q86Y07 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 AL139400.1-201ENST00000366220 510 ntBASIC14.44□□□□□ -0.1
VRK2Q86Y07 KRT18P13-201ENST00000400056 1290 ntBASIC14.44□□□□□ -0.1
VRK2Q86Y07 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 AL033527.5-202ENST00000641632 1098 ntBASIC14.44□□□□□ -0.1
VRK2Q86Y07 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VRK2Q86Y07 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK2Q86Y07 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 TSEN15P1-201ENST00000423257 515 ntBASIC14.43□□□□□ -0.1
VRK2Q86Y07 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 SERBP1P3-201ENST00000459980 809 ntBASIC14.43□□□□□ -0.1
VRK2Q86Y07 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK2Q86Y07 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.43□□□□□ -0.1
VRK2Q86Y07 AC025048.3-201ENST00000590609 569 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms