Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 AC084364.1-201ENST00000551967 1556 ntBASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 PCDHA3-202ENST00000532566 4594 ntBASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRRTM1Q86UE6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 AC064836.3-201ENST00000607928 673 ntBASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 AL031008.1-201ENST00000619963 541 ntBASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 AC008267.7-201ENST00000624570 1194 ntBASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 REXO1L2P-201ENST00000425429 2069 ntBASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.58□□□□□ -0.24
LRRTM1Q86UE6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 MIR1224-201ENST00000408193 85 ntBASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 PDPK2P-202ENST00000562415 1191 ntBASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 AC104692.2-201ENST00000603054 253 ntBASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LRRTM1Q86UE6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms