Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 PIN1P1-201ENST00000412108 996 ntBASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 AL353779.1-201ENST00000434793 351 ntBASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 KRT18P64-201ENST00000434946 1219 ntBASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 RARRES2P5-201ENST00000564013 466 ntBASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 AL391825.1-201ENST00000457671 1364 ntBASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.45□□□□□ -0.1
NUP54Q7Z3B4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 CICP6-201ENST00000457191 2729 ntBASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 AC087499.6-201ENST00000411576 835 ntBASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 DFFBP1-201ENST00000433250 979 ntBASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 GNAQP1-201ENST00000444815 1067 ntBASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 RRP7BP-205ENST00000566851 833 ntBASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 AC132872.4-202ENST00000622924 2756 ntBASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 AC007541.1-201ENST00000570282 1469 ntBASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NUP54Q7Z3B4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NUP54Q7Z3B4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms