Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
C11orf88Q6PI97 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC006504.4-201ENST00000592118 1568 ntBASIC13.72□□□□□ -0.21
C11orf88Q6PI97 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 RPSAP43-201ENST00000402237 625 ntBASIC13.72□□□□□ -0.21
C11orf88Q6PI97 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC091167.2-201ENST00000579581 588 ntBASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC064836.3-201ENST00000607928 673 ntBASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AL805961.1-202ENST00000641562 540 ntBASIC13.72□□□□□ -0.21
C11orf88Q6PI97 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
C11orf88Q6PI97 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 AC232323.1-201ENST00000540724 2099 ntBASIC13.71□□□□□ -0.21
C11orf88Q6PI97 REXO1L5P-201ENST00000622260 2098 ntBASIC13.71□□□□□ -0.21
C11orf88Q6PI97 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 AC007191.1-201ENST00000623179 2995 ntBASIC13.71□□□□□ -0.21
C11orf88Q6PI97 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 ELK2BP-201ENST00000415014 1224 ntBASIC13.71□□□□□ -0.21
C11orf88Q6PI97 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 AC092183.1-201ENST00000469884 875 ntBASIC13.71□□□□□ -0.21
C11orf88Q6PI97 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 MPDU1-223ENST00000582151 728 ntBASIC13.71□□□□□ -0.21
C11orf88Q6PI97 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
C11orf88Q6PI97 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
C11orf88Q6PI97 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms