Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 HTR5BP-201ENST00000430851 1154 ntBASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 RN7SL589P-201ENST00000481268 310 ntBASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 AC092865.5-201ENST00000545435 363 ntBASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TMEM53Q6P2H8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 TFAMP1-201ENST00000412727 736 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AL355306.1-201ENST00000415580 579 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 SPDYE11-202ENST00000450699 704 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 SPDYE9P-201ENST00000570642 692 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AC099522.2-201ENST00000607001 744 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 SPDYE10P-202ENST00000612005 668 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 SPDYE8P-202ENST00000612377 668 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AC092902.6-201ENST00000641783 218 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 AL109954.1-202ENST00000564051 2148 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 MIR600HG-201ENST00000449175 5984 ntBASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TMEM53Q6P2H8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TMEM53Q6P2H8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms