Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AC002056.1-201ENST00000395613 760 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AL139010.1-201ENST00000454878 894 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 RNA5SP410-201ENST00000516285 106 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 RNA5SP415-201ENST00000517246 115 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 HNRNPUP1-201ENST00000554987 333 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 KRT19P2-202ENST00000557173 1012 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AC097359.3-201ENST00000603982 1210 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AL773604.1-201ENST00000617417 272 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AL031008.1-201ENST00000619963 541 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 AC116407.3-201ENST00000623905 1129 ntBASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
LINC00242Q5T6M2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 CICP11-201ENST00000434745 2827 ntBASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms