Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 PMS2P7-201ENST00000506558 1336 ntBASIC14.28□□□□□ -0.12
RBM48Q5RL73 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RBM48Q5RL73 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RBM48Q5RL73 AC089987.1-201ENST00000551654 2209 ntBASIC14.27□□□□□ -0.12
RBM48Q5RL73 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 AC073439.1-201ENST00000624121 1774 ntBASIC14.27□□□□□ -0.12
RBM48Q5RL73 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RBM48Q5RL73 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RBM48Q5RL73 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBM48Q5RL73 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBM48Q5RL73 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBM48Q5RL73 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 KRT18P31-201ENST00000506277 1292 ntBASIC14.27□□□□□ -0.13
RBM48Q5RL73 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 AC006557.2-201ENST00000592985 1240 ntBASIC14.27□□□□□ -0.13
RBM48Q5RL73 AC138894.3-201ENST00000603787 634 ntBASIC14.27□□□□□ -0.13
RBM48Q5RL73 AC069148.1-201ENST00000608741 768 ntBASIC14.27□□□□□ -0.13
RBM48Q5RL73 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RBM48Q5RL73 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RBM48Q5RL73 PTENP1-202ENST00000532280 3996 ntBASIC14.27□□□□□ -0.13
RBM48Q5RL73 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBM48Q5RL73 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.27□□□□□ -0.13
RBM48Q5RL73 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBM48Q5RL73 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RBM48Q5RL73 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RBM48Q5RL73 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
RBM48Q5RL73 PCED1CP-201ENST00000419887 785 ntBASIC14.26□□□□□ -0.13
RBM48Q5RL73 KRT16P4-201ENST00000453883 522 ntBASIC14.26□□□□□ -0.13
RBM48Q5RL73 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms