Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 AC009542.2-202ENST00000619004 1067 ntBASIC18.48■□□□□ 0.55
PDS5AQ29RF7 MIR6869-201ENST00000619434 62 ntBASIC18.48■□□□□ 0.55
PDS5AQ29RF7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDS5AQ29RF7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 AL360270.3-201ENST00000609118 1348 ntBASIC18.47■□□□□ 0.55
PDS5AQ29RF7 AC046158.3-201ENST00000624947 2558 ntBASIC18.47■□□□□ 0.55
PDS5AQ29RF7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 TPM3P8-201ENST00000330554 643 ntBASIC18.47■□□□□ 0.55
PDS5AQ29RF7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.47■□□□□ 0.55
PDS5AQ29RF7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 RN7SL560P-201ENST00000577943 264 ntBASIC18.46■□□□□ 0.55
PDS5AQ29RF7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDS5AQ29RF7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms