Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDR1Q08345 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
DDR1Q08345 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
DDR1Q08345 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 AC069224.1-201ENST00000566372 1715 ntBASIC19.05■□□□□ 0.64
DDR1Q08345 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.05■□□□□ 0.64
DDR1Q08345 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
DDR1Q08345 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
DDR1Q08345 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.05■□□□□ 0.64
DDR1Q08345 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.05■□□□□ 0.64
DDR1Q08345 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 AL157791.1-201ENST00000553667 1699 ntBASIC19.05■□□□□ 0.64
DDR1Q08345 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 ISCA2P1-201ENST00000425548 448 ntBASIC19.05■□□□□ 0.64
DDR1Q08345 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 TUBB8P8-201ENST00000458717 1058 ntBASIC19.05■□□□□ 0.64
DDR1Q08345 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
DDR1Q08345 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 AC011491.1-203ENST00000637688 543 ntBASIC19.05■□□□□ 0.64
DDR1Q08345 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
DDR1Q08345 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
DDR1Q08345 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
DDR1Q08345 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
DDR1Q08345 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.04■□□□□ 0.64
DDR1Q08345 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
DDR1Q08345 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
DDR1Q08345 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.04■□□□□ 0.64
DDR1Q08345 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.04■□□□□ 0.64
DDR1Q08345 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.04■□□□□ 0.64
DDR1Q08345 AC114501.1-201ENST00000445949 172 ntBASIC19.04■□□□□ 0.64
DDR1Q08345 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
DDR1Q08345 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.04■□□□□ 0.64
DDR1Q08345 NPM1P43-201ENST00000558669 786 ntBASIC19.04■□□□□ 0.64
DDR1Q08345 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.04■□□□□ 0.64
DDR1Q08345 AC012044.1-201ENST00000603431 297 ntBASIC19.04■□□□□ 0.64
DDR1Q08345 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.04■□□□□ 0.64
DDR1Q08345 AC090164.2-201ENST00000611487 516 ntBASIC19.04■□□□□ 0.64
DDR1Q08345 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.04■□□□□ 0.64
DDR1Q08345 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
DDR1Q08345 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
DDR1Q08345 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.04■□□□□ 0.64
DDR1Q08345 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.04■□□□□ 0.64
DDR1Q08345 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
DDR1Q08345 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.03■□□□□ 0.64
DDR1Q08345 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDR1Q08345 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
DDR1Q08345 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
DDR1Q08345 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.03■□□□□ 0.64
DDR1Q08345 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 PUDPP3-201ENST00000445368 636 ntBASIC19.03■□□□□ 0.64
DDR1Q08345 RN7SL181P-201ENST00000462921 277 ntBASIC19.03■□□□□ 0.64
DDR1Q08345 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 AC019193.1-201ENST00000506678 823 ntBASIC19.03■□□□□ 0.64
DDR1Q08345 CFL1-206ENST00000527344 962 ntTSL 2 BASIC19.03■□□□□ 0.64
DDR1Q08345 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.03■□□□□ 0.64
DDR1Q08345 RTN3P1-201ENST00000536295 711 ntBASIC19.03■□□□□ 0.64
DDR1Q08345 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.03■□□□□ 0.64
DDR1Q08345 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 AC242376.1-201ENST00000559033 726 ntBASIC19.03■□□□□ 0.64
DDR1Q08345 RN7SL736P-201ENST00000613111 269 ntBASIC19.03■□□□□ 0.64
DDR1Q08345 AC006453.1-201ENST00000636037 1257 ntBASIC19.03■□□□□ 0.64
DDR1Q08345 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDR1Q08345 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DDR1Q08345 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms