Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HMGCS1Q01581 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 AC007686.3-201ENST00000619017 3487 ntBASIC15.07■□□□□ 0
HMGCS1Q01581 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.07■□□□□ 0
HMGCS1Q01581 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.07■□□□□ 0
HMGCS1Q01581 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.07■□□□□ 0
HMGCS1Q01581 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.07■□□□□ 0
HMGCS1Q01581 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HMGCS1Q01581 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.07■□□□□ 0
HMGCS1Q01581 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.07■□□□□ 0
HMGCS1Q01581 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCS1Q01581 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.06■□□□□ 0
HMGCS1Q01581 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HMGCS1Q01581 AC126755.1-201ENST00000525846 6405 ntBASIC15.06■□□□□ 0
HMGCS1Q01581 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HMGCS1Q01581 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HMGCS1Q01581 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.06■□□□□ 0
HMGCS1Q01581 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.06■□□□□ 0
HMGCS1Q01581 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.06■□□□□ 0
HMGCS1Q01581 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.06■□□□□ 0
HMGCS1Q01581 AL589739.1-201ENST00000607720 493 ntBASIC15.06■□□□□ 0
HMGCS1Q01581 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.06■□□□□ 0
HMGCS1Q01581 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HMGCS1Q01581 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.06■□□□□ 0
HMGCS1Q01581 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCS1Q01581 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
HMGCS1Q01581 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.05■□□□□ 0
HMGCS1Q01581 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.05■□□□□ 0
HMGCS1Q01581 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.05■□□□□ 0
HMGCS1Q01581 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCS1Q01581 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
HMGCS1Q01581 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.05■□□□□ -0
HMGCS1Q01581 AC074338.1-201ENST00000416825 156 ntBASIC15.05■□□□□ -0
HMGCS1Q01581 SPDYE7P-202ENST00000420373 878 ntBASIC15.05■□□□□ -0
HMGCS1Q01581 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.05■□□□□ -0
HMGCS1Q01581 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.05■□□□□ -0
HMGCS1Q01581 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.05■□□□□ -0
HMGCS1Q01581 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCS1Q01581 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.05■□□□□ -0
HMGCS1Q01581 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.05■□□□□ -0
HMGCS1Q01581 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.05■□□□□ -0
HMGCS1Q01581 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
HMGCS1Q01581 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.05■□□□□ -0
HMGCS1Q01581 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.05■□□□□ -0
HMGCS1Q01581 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCS1Q01581 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCS1Q01581 AC084364.1-201ENST00000551967 1556 ntBASIC15.05■□□□□ -0
HMGCS1Q01581 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
HMGCS1Q01581 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms