Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H6P61129 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZC3H6P61129 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H6P61129 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H6P61129 AC008267.1-201ENST00000474858 1069 ntBASIC20.53■□□□□ 0.88
ZC3H6P61129 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC20.53■□□□□ 0.88
ZC3H6P61129 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H6P61129 AL023803.2-201ENST00000620080 638 ntBASIC20.53■□□□□ 0.88
ZC3H6P61129 AC100757.4-201ENST00000626934 759 ntBASIC20.53■□□□□ 0.88
ZC3H6P61129 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H6P61129 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3H6P61129 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3H6P61129 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 OR6D1P-203ENST00000641209 4860 ntBASIC20.53■□□□□ 0.88
ZC3H6P61129 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3H6P61129 CLUHP2-201ENST00000426660 1303 ntBASIC20.53■□□□□ 0.88
ZC3H6P61129 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
ZC3H6P61129 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
ZC3H6P61129 NPPA-201ENST00000376476 728 ntTSL 3 BASIC20.52■□□□□ 0.88
ZC3H6P61129 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.52■□□□□ 0.88
ZC3H6P61129 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.52■□□□□ 0.88
ZC3H6P61129 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.52■□□□□ 0.88
ZC3H6P61129 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC20.52■□□□□ 0.88
ZC3H6P61129 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 AC004923.1-202ENST00000642106 209 ntBASIC20.52■□□□□ 0.88
ZC3H6P61129 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.52■□□□□ 0.88
ZC3H6P61129 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZC3H6P61129 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3H6P61129 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZC3H6P61129 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3H6P61129 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3H6P61129 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
ZC3H6P61129 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.51■□□□□ 0.87
ZC3H6P61129 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H6P61129 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 AL136309.1-201ENST00000403917 691 ntBASIC20.51■□□□□ 0.87
ZC3H6P61129 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H6P61129 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZC3H6P61129 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC20.51■□□□□ 0.87
ZC3H6P61129 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.51■□□□□ 0.87
ZC3H6P61129 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H6P61129 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
ZC3H6P61129 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
ZC3H6P61129 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.51■□□□□ 0.87
ZC3H6P61129 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.51■□□□□ 0.87
ZC3H6P61129 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 MIR4683-201ENST00000579659 81 ntBASIC20.51■□□□□ 0.87
ZC3H6P61129 RN7SL555P-201ENST00000584742 339 ntBASIC20.51■□□□□ 0.87
ZC3H6P61129 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 AC138466.3-201ENST00000619983 221 ntBASIC20.51■□□□□ 0.87
ZC3H6P61129 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3H6P61129 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3H6P61129 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H6P61129 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H6P61129 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H6P61129 AC004899.1-201ENST00000424687 1714 ntBASIC20.5■□□□□ 0.87
ZC3H6P61129 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3H6P61129 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
ZC3H6P61129 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ZC3H6P61129 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ZC3H6P61129 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms