Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VSX2P58304 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.95□□□□□ -0.02
VSX2P58304 FAM86LP-201ENST00000478302 853 ntBASIC14.95□□□□□ -0.02
VSX2P58304 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
VSX2P58304 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.95□□□□□ -0.02
VSX2P58304 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.95□□□□□ -0.02
VSX2P58304 AL596325.1-201ENST00000563991 1082 ntBASIC14.95□□□□□ -0.02
VSX2P58304 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.95□□□□□ -0.02
VSX2P58304 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.95□□□□□ -0.02
VSX2P58304 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.95□□□□□ -0.02
VSX2P58304 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.95□□□□□ -0.02
VSX2P58304 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
VSX2P58304 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.95□□□□□ -0.02
VSX2P58304 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.95□□□□□ -0.02
VSX2P58304 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.95□□□□□ -0.02
VSX2P58304 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.95□□□□□ -0.02
VSX2P58304 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VSX2P58304 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 ELK1P1-201ENST00000485699 580 ntBASIC14.94□□□□□ -0.02
VSX2P58304 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.94□□□□□ -0.02
VSX2P58304 AC005225.4-201ENST00000557330 545 ntBASIC14.94□□□□□ -0.02
VSX2P58304 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.94□□□□□ -0.02
VSX2P58304 CTBP2P3-201ENST00000585629 1255 ntBASIC14.94□□□□□ -0.02
VSX2P58304 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.94□□□□□ -0.02
VSX2P58304 AC012645.4-201ENST00000610691 1061 ntBASIC14.94□□□□□ -0.02
VSX2P58304 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.94□□□□□ -0.02
VSX2P58304 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.94□□□□□ -0.02
VSX2P58304 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.94□□□□□ -0.02
VSX2P58304 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VSX2P58304 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
VSX2P58304 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
VSX2P58304 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
VSX2P58304 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VSX2P58304 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms