Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 AL450472.2-201ENST00000603663 1156 ntBASIC14.6□□□□□ -0.07
CDH12P55289 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CDH12P55289 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 AC232323.1-201ENST00000540724 2099 ntBASIC14.6□□□□□ -0.07
CDH12P55289 REXO1L5P-201ENST00000622260 2098 ntBASIC14.6□□□□□ -0.07
CDH12P55289 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 FGD5P1-202ENST00000614866 2498 ntBASIC14.6□□□□□ -0.07
CDH12P55289 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 UXT-AS1-201ENST00000590504 1525 ntBASIC14.6□□□□□ -0.07
CDH12P55289 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH12P55289 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CDH12P55289 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH12P55289 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH12P55289 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDH12P55289 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDH12P55289 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 HTR5BP-201ENST00000430851 1154 ntBASIC14.59□□□□□ -0.07
CDH12P55289 MKNK2P1-201ENST00000437526 628 ntBASIC14.59□□□□□ -0.07
CDH12P55289 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH12P55289 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH12P55289 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH12P55289 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 MTDHP5-201ENST00000598980 586 ntBASIC14.59□□□□□ -0.07
CDH12P55289 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CDH12P55289 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 AL390755.1-201ENST00000623716 2027 ntBASIC14.59□□□□□ -0.07
CDH12P55289 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH12P55289 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CDH12P55289 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH12P55289 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH12P55289 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CDH12P55289 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.58□□□□□ -0.07
CDH12P55289 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH12P55289 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CDH12P55289 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.58□□□□□ -0.07
CDH12P55289 AC005089.1-201ENST00000619486 2241 ntBASIC14.58□□□□□ -0.07
CDH12P55289 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH12P55289 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH12P55289 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.58□□□□□ -0.07
CDH12P55289 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
CDH12P55289 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH12P55289 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH12P55289 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH12P55289 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH12P55289 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH12P55289 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH12P55289 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CDH12P55289 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH12P55289 AL592309.1-201ENST00000443127 649 ntBASIC14.58□□□□□ -0.08
CDH12P55289 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms