Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.88■□□□□ 0.13
CDH4P55283 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH4P55283 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH4P55283 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDH4P55283 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH4P55283 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH4P55283 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CDH4P55283 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH4P55283 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH4P55283 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
CDH4P55283 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDH4P55283 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH4P55283 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDH4P55283 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH4P55283 GIMAP3P-201ENST00000495150 836 ntBASIC15.87■□□□□ 0.13
CDH4P55283 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.87■□□□□ 0.13
CDH4P55283 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH4P55283 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH4P55283 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH4P55283 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.87■□□□□ 0.13
CDH4P55283 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH4P55283 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.87■□□□□ 0.13
CDH4P55283 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.87■□□□□ 0.13
CDH4P55283 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.87■□□□□ 0.13
CDH4P55283 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDH4P55283 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
CDH4P55283 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH4P55283 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CDH4P55283 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CDH4P55283 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 ACTG1P3-201ENST00000431775 1114 ntBASIC15.86■□□□□ 0.13
CDH4P55283 TTTY23B-201ENST00000442790 549 ntBASIC15.86■□□□□ 0.13
CDH4P55283 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH4P55283 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.86■□□□□ 0.13
CDH4P55283 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH4P55283 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.86■□□□□ 0.13
CDH4P55283 CLUHP6-201ENST00000580789 941 ntBASIC15.86■□□□□ 0.13
CDH4P55283 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.86■□□□□ 0.13
CDH4P55283 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH4P55283 AC015936.2-201ENST00000593177 259 ntBASIC15.86■□□□□ 0.13
CDH4P55283 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH4P55283 RPSAP52-203ENST00000622976 1023 ntBASIC15.86■□□□□ 0.13
CDH4P55283 AC005252.2-201ENST00000624630 1141 ntBASIC15.86■□□□□ 0.13
CDH4P55283 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CDH4P55283 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH4P55283 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH4P55283 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH4P55283 SSR4P1-203ENST00000599569 2260 ntBASIC15.85■□□□□ 0.13
CDH4P55283 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH4P55283 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms