Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
PMS1P54277 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PMS1P54277 AC015922.1-201ENST00000421102 1152 ntBASIC17.15■□□□□ 0.34
PMS1P54277 CNN2P2-201ENST00000443536 909 ntBASIC17.15■□□□□ 0.34
PMS1P54277 CNN2P3-201ENST00000450201 906 ntBASIC17.15■□□□□ 0.34
PMS1P54277 KLF2P3-201ENST00000451977 1087 ntBASIC17.15■□□□□ 0.34
PMS1P54277 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PMS1P54277 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 AC015911.4-201ENST00000588022 1070 ntBASIC17.15■□□□□ 0.34
PMS1P54277 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.15■□□□□ 0.34
PMS1P54277 AP001160.2-201ENST00000596071 487 ntBASIC17.15■□□□□ 0.34
PMS1P54277 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 AL136317.3-201ENST00000618497 906 ntBASIC17.15■□□□□ 0.34
PMS1P54277 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.15■□□□□ 0.34
PMS1P54277 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PMS1P54277 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.15■□□□□ 0.34
PMS1P54277 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 REXO1L2P-201ENST00000425429 2069 ntBASIC17.15■□□□□ 0.34
PMS1P54277 FGD5P1-202ENST00000614866 2498 ntBASIC17.15■□□□□ 0.34
PMS1P54277 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.15■□□□□ 0.34
PMS1P54277 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.15■□□□□ 0.34
PMS1P54277 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PMS1P54277 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.15■□□□□ 0.34
PMS1P54277 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.15■□□□□ 0.34
PMS1P54277 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PMS1P54277 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PMS1P54277 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.14■□□□□ 0.34
PMS1P54277 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PMS1P54277 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.14■□□□□ 0.34
PMS1P54277 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
PMS1P54277 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
PMS1P54277 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.14■□□□□ 0.34
PMS1P54277 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PMS1P54277 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.14■□□□□ 0.33
PMS1P54277 LINC01101-201ENST00000622953 1884 ntBASIC17.14■□□□□ 0.33
PMS1P54277 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PMS1P54277 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.14■□□□□ 0.33
PMS1P54277 AC023908.3-201ENST00000564211 3047 ntBASIC17.14■□□□□ 0.33
PMS1P54277 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.14■□□□□ 0.33
PMS1P54277 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.14■□□□□ 0.33
PMS1P54277 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.14■□□□□ 0.33
PMS1P54277 AC044860.1-202ENST00000559481 777 ntBASIC17.14■□□□□ 0.33
PMS1P54277 AC004449.1-201ENST00000564240 433 ntBASIC17.14■□□□□ 0.33
PMS1P54277 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.14■□□□□ 0.33
PMS1P54277 ACE3P-201ENST00000423435 1973 ntBASIC17.14■□□□□ 0.33
PMS1P54277 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PMS1P54277 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PMS1P54277 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
PMS1P54277 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PMS1P54277 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.13■□□□□ 0.33
PMS1P54277 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PMS1P54277 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
PMS1P54277 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.13■□□□□ 0.33
PMS1P54277 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PMS1P54277 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.13■□□□□ 0.33
PMS1P54277 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms