Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBP50607 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBP50607 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.46■□□□□ 0.22
TUBP50607 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
TUBP50607 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.46■□□□□ 0.22
TUBP50607 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TUBP50607 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TUBP50607 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.45■□□□□ 0.22
TUBP50607 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.45■□□□□ 0.22
TUBP50607 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 AL442647.2-201ENST00000429864 857 ntBASIC16.45■□□□□ 0.22
TUBP50607 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.45■□□□□ 0.22
TUBP50607 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.45■□□□□ 0.22
TUBP50607 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.45■□□□□ 0.22
TUBP50607 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.45■□□□□ 0.22
TUBP50607 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 AC092552.1-201ENST00000547243 906 ntBASIC16.45■□□□□ 0.22
TUBP50607 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 CTBP2P3-201ENST00000585629 1255 ntBASIC16.45■□□□□ 0.22
TUBP50607 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBP50607 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TUBP50607 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TUBP50607 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBP50607 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBP50607 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.44■□□□□ 0.22
TUBP50607 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 PRAL-201ENST00000624952 3286 ntBASIC16.44■□□□□ 0.22
TUBP50607 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.44■□□□□ 0.22
TUBP50607 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.44■□□□□ 0.22
TUBP50607 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TUBP50607 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
TUBP50607 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.44■□□□□ 0.22
TUBP50607 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TUBP50607 KRT18P64-201ENST00000434946 1219 ntBASIC16.44■□□□□ 0.22
TUBP50607 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBP50607 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBP50607 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBP50607 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TUBP50607 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.44■□□□□ 0.22
TUBP50607 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.44■□□□□ 0.22
TUBP50607 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.44■□□□□ 0.22
TUBP50607 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.44■□□□□ 0.22
TUBP50607 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
TUBP50607 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms