Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.24□□□□□ -0.13
CENPAP49450 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CENPAP49450 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.24□□□□□ -0.13
CENPAP49450 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.24□□□□□ -0.13
CENPAP49450 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.24□□□□□ -0.13
CENPAP49450 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.24□□□□□ -0.13
CENPAP49450 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.24□□□□□ -0.13
CENPAP49450 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.24□□□□□ -0.13
CENPAP49450 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.24□□□□□ -0.13
CENPAP49450 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CENPAP49450 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CENPAP49450 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CENPAP49450 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CENPAP49450 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.24□□□□□ -0.13
CENPAP49450 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CENPAP49450 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.24□□□□□ -0.13
CENPAP49450 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.24□□□□□ -0.13
CENPAP49450 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.24□□□□□ -0.13
CENPAP49450 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.24□□□□□ -0.13
CENPAP49450 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CENPAP49450 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 FAM220BP-201ENST00000377689 816 ntBASIC14.23□□□□□ -0.13
CENPAP49450 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CENPAP49450 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 AL022342.1-201ENST00000400363 863 ntBASIC14.23□□□□□ -0.13
CENPAP49450 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.23□□□□□ -0.13
CENPAP49450 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CENPAP49450 AC079140.1-201ENST00000508039 487 ntBASIC14.23□□□□□ -0.13
CENPAP49450 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 KRT8P48-201ENST00000515599 1220 ntBASIC14.23□□□□□ -0.13
CENPAP49450 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
CENPAP49450 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.23□□□□□ -0.13
CENPAP49450 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
CENPAP49450 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CENPAP49450 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.23□□□□□ -0.13
CENPAP49450 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CENPAP49450 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms