Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC34P49427 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC34P49427 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 BX640514.1-201ENST00000583223 1918 ntBASIC12.39□□□□□ -0.43
CDC34P49427 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 PEG13-201ENST00000631594 5667 ntBASIC12.39□□□□□ -0.43
CDC34P49427 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC34P49427 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC34P49427 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CDC34P49427 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.39□□□□□ -0.43
CDC34P49427 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 GPX1P2-201ENST00000429271 606 ntBASIC12.39□□□□□ -0.43
CDC34P49427 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC34P49427 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.39□□□□□ -0.43
CDC34P49427 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.39□□□□□ -0.43
CDC34P49427 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
CDC34P49427 AC008667.4-201ENST00000607370 168 ntBASIC12.39□□□□□ -0.43
CDC34P49427 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.39□□□□□ -0.43
CDC34P49427 AL732292.2-201ENST00000609649 430 ntBASIC12.39□□□□□ -0.43
CDC34P49427 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC34P49427 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 WASH3P-207ENST00000560956 1394 ntBASIC12.39□□□□□ -0.43
CDC34P49427 FO538757.1-201ENST00000623083 1397 ntBASIC12.39□□□□□ -0.43
CDC34P49427 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CDC34P49427 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.39□□□□□ -0.43
CDC34P49427 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CDC34P49427 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC34P49427 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.38□□□□□ -0.43
CDC34P49427 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.38□□□□□ -0.43
CDC34P49427 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.38□□□□□ -0.43
CDC34P49427 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.38□□□□□ -0.43
CDC34P49427 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CDC34P49427 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.38□□□□□ -0.43
CDC34P49427 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CDC34P49427 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CDC34P49427 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.38□□□□□ -0.43
CDC34P49427 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CDC34P49427 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.38□□□□□ -0.43
CDC34P49427 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 DUSP5P1-201ENST00000441325 1139 ntBASIC12.38□□□□□ -0.43
CDC34P49427 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.38□□□□□ -0.43
CDC34P49427 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CDC34P49427 KRT18P31-201ENST00000506277 1292 ntBASIC12.38□□□□□ -0.43
CDC34P49427 AC136632.2-201ENST00000512891 861 ntBASIC12.38□□□□□ -0.43
CDC34P49427 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.38□□□□□ -0.43
CDC34P49427 AL031432.2-201ENST00000566714 459 ntBASIC12.38□□□□□ -0.43
CDC34P49427 AC002347.1-201ENST00000569543 541 ntBASIC12.38□□□□□ -0.43
CDC34P49427 AL928711.1-201ENST00000570165 459 ntBASIC12.38□□□□□ -0.43
CDC34P49427 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.38□□□□□ -0.43
CDC34P49427 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.38□□□□□ -0.43
CDC34P49427 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CDC34P49427 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CDC34P49427 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.38□□□□□ -0.43
CDC34P49427 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms