Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GRIK1P39086 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GRIK1P39086 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRIK1P39086 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRIK1P39086 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRIK1P39086 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
GRIK1P39086 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GRIK1P39086 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GRIK1P39086 PKD1P5-201ENST00000532415 10291 ntBASIC16.4■□□□□ 0.22
GRIK1P39086 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 ACTG1P3-201ENST00000431775 1114 ntBASIC16.4■□□□□ 0.22
GRIK1P39086 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 HILS1-202ENST00000545329 423 ntBASIC16.4■□□□□ 0.22
GRIK1P39086 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.4■□□□□ 0.22
GRIK1P39086 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.4■□□□□ 0.22
GRIK1P39086 AC093813.1-201ENST00000605066 256 ntBASIC16.4■□□□□ 0.22
GRIK1P39086 AC107373.2-201ENST00000607735 490 ntBASIC16.4■□□□□ 0.22
GRIK1P39086 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.4■□□□□ 0.22
GRIK1P39086 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GRIK1P39086 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GRIK1P39086 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.4■□□□□ 0.22
GRIK1P39086 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GRIK1P39086 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GRIK1P39086 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
GRIK1P39086 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.39■□□□□ 0.21
GRIK1P39086 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
GRIK1P39086 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GRIK1P39086 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GRIK1P39086 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 AC112492.5-201ENST00000421897 457 ntBASIC16.39■□□□□ 0.21
GRIK1P39086 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.39■□□□□ 0.21
GRIK1P39086 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.39■□□□□ 0.21
GRIK1P39086 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GRIK1P39086 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.39■□□□□ 0.21
GRIK1P39086 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 RAB43P1-201ENST00000561790 589 ntBASIC16.39■□□□□ 0.21
GRIK1P39086 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.39■□□□□ 0.21
GRIK1P39086 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.39■□□□□ 0.21
GRIK1P39086 AC025181.2-201ENST00000606994 802 ntBASIC16.39■□□□□ 0.21
GRIK1P39086 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 RPSAP52-203ENST00000622976 1023 ntBASIC16.39■□□□□ 0.21
GRIK1P39086 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GRIK1P39086 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
GRIK1P39086 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GRIK1P39086 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.39■□□□□ 0.21
GRIK1P39086 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms