Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.49■□□□□ 0.23
CHKAP35790 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.49■□□□□ 0.23
CHKAP35790 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.49■□□□□ 0.23
CHKAP35790 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.49■□□□□ 0.23
CHKAP35790 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHKAP35790 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.48■□□□□ 0.23
CHKAP35790 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.48■□□□□ 0.23
CHKAP35790 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.48■□□□□ 0.23
CHKAP35790 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 AC063926.2-201ENST00000623766 1308 ntBASIC16.48■□□□□ 0.23
CHKAP35790 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 TCAF2P1-201ENST00000291129 2421 ntBASIC16.48■□□□□ 0.23
CHKAP35790 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHKAP35790 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.48■□□□□ 0.23
CHKAP35790 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.48■□□□□ 0.23
CHKAP35790 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.48■□□□□ 0.23
CHKAP35790 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.48■□□□□ 0.23
CHKAP35790 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.48■□□□□ 0.23
CHKAP35790 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.48■□□□□ 0.23
CHKAP35790 TP53TG3HP-202ENST00000569755 579 ntBASIC16.48■□□□□ 0.23
CHKAP35790 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.48■□□□□ 0.23
CHKAP35790 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.48■□□□□ 0.23
CHKAP35790 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CHKAP35790 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CHKAP35790 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CHKAP35790 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHKAP35790 Z97205.2-201ENST00000564697 1639 ntBASIC16.48■□□□□ 0.23
CHKAP35790 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CHKAP35790 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHKAP35790 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.48■□□□□ 0.23
CHKAP35790 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 AC106881.1-201ENST00000605849 3329 ntBASIC16.47■□□□□ 0.23
CHKAP35790 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
CHKAP35790 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 API5-211ENST00000534695 560 ntTSL 5 BASIC16.47■□□□□ 0.23
CHKAP35790 TPRX2P-201ENST00000535362 881 ntBASIC16.47■□□□□ 0.23
CHKAP35790 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.47■□□□□ 0.23
CHKAP35790 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 AC092337.1-201ENST00000568699 1129 ntBASIC16.47■□□□□ 0.23
CHKAP35790 AC140912.1-201ENST00000577171 1054 ntBASIC16.47■□□□□ 0.23
CHKAP35790 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 AC239800.4-201ENST00000603712 296 ntBASIC16.47■□□□□ 0.23
CHKAP35790 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 AC012645.4-201ENST00000610691 1061 ntBASIC16.47■□□□□ 0.23
CHKAP35790 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CHKAP35790 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.47■□□□□ 0.23
CHKAP35790 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHKAP35790 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms