Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC1P35251 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFC1P35251 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.47■□□□□ 0.23
RFC1P35251 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.47■□□□□ 0.23
RFC1P35251 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.47■□□□□ 0.23
RFC1P35251 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 AC055876.3-201ENST00000431496 288 ntBASIC16.47■□□□□ 0.23
RFC1P35251 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.47■□□□□ 0.23
RFC1P35251 SDHAP3-202ENST00000515467 728 ntBASIC16.47■□□□□ 0.23
RFC1P35251 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 AC138649.4-201ENST00000612222 287 ntBASIC16.47■□□□□ 0.23
RFC1P35251 AC106028.4-201ENST00000614509 607 ntBASIC16.47■□□□□ 0.23
RFC1P35251 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
RFC1P35251 AC093512.1-201ENST00000617969 520 ntBASIC16.47■□□□□ 0.23
RFC1P35251 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFC1P35251 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFC1P35251 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC1P35251 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.47■□□□□ 0.23
RFC1P35251 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RFC1P35251 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.47■□□□□ 0.23
RFC1P35251 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.47■□□□□ 0.23
RFC1P35251 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFC1P35251 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.46■□□□□ 0.23
RFC1P35251 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.46■□□□□ 0.23
RFC1P35251 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
RFC1P35251 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.46■□□□□ 0.23
RFC1P35251 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
RFC1P35251 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RFC1P35251 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.46■□□□□ 0.23
RFC1P35251 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.46■□□□□ 0.23
RFC1P35251 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.46■□□□□ 0.23
RFC1P35251 AC241585.1-201ENST00000433527 519 ntBASIC16.46■□□□□ 0.23
RFC1P35251 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 SLED1-202ENST00000512051 380 ntBASIC16.46■□□□□ 0.23
RFC1P35251 IGHV3-42-201ENST00000520410 361 ntBASIC16.46■□□□□ 0.23
RFC1P35251 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.46■□□□□ 0.23
RFC1P35251 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.46■□□□□ 0.23
RFC1P35251 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.46■□□□□ 0.23
RFC1P35251 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.46■□□□□ 0.23
RFC1P35251 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RFC1P35251 AC074044.1-201ENST00000609673 707 ntBASIC16.46■□□□□ 0.23
RFC1P35251 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.46■□□□□ 0.23
RFC1P35251 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.46■□□□□ 0.23
RFC1P35251 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.46■□□□□ 0.23
RFC1P35251 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFC1P35251 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.46■□□□□ 0.23
RFC1P35251 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.46■□□□□ 0.22
RFC1P35251 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 SBF1P1-201ENST00000444527 5631 ntBASIC16.45■□□□□ 0.22
RFC1P35251 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RFC1P35251 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RFC1P35251 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RFC1P35251 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC1P35251 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.45■□□□□ 0.22
RFC1P35251 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RFC1P35251 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RFC1P35251 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.45■□□□□ 0.22
RFC1P35251 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RFC1P35251 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms