Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.23■□□□□ 0.03
EPHA3P29320 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.23■□□□□ 0.03
EPHA3P29320 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 AL607033.1-201ENST00000623900 1599 ntBASIC15.23■□□□□ 0.03
EPHA3P29320 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
EPHA3P29320 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
EPHA3P29320 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.23■□□□□ 0.03
EPHA3P29320 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
EPHA3P29320 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 AKAP8P1-201ENST00000434743 1349 ntBASIC15.22■□□□□ 0.03
EPHA3P29320 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 ACE3P-201ENST00000423435 1973 ntBASIC15.22■□□□□ 0.03
EPHA3P29320 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
EPHA3P29320 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
EPHA3P29320 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.22■□□□□ 0.03
EPHA3P29320 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.22■□□□□ 0.03
EPHA3P29320 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.22■□□□□ 0.03
EPHA3P29320 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.22■□□□□ 0.03
EPHA3P29320 AC145285.3-201ENST00000564603 959 ntBASIC15.22■□□□□ 0.03
EPHA3P29320 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA3P29320 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 OR2I1P-209ENST00000641730 5365 ntBASIC15.22■□□□□ 0.03
EPHA3P29320 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA3P29320 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
EPHA3P29320 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.22■□□□□ 0.03
EPHA3P29320 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
EPHA3P29320 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.22■□□□□ 0.03
EPHA3P29320 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.21■□□□□ 0.03
EPHA3P29320 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.21■□□□□ 0.03
EPHA3P29320 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
EPHA3P29320 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.21■□□□□ 0.03
EPHA3P29320 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.21■□□□□ 0.03
EPHA3P29320 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.21■□□□□ 0.03
EPHA3P29320 SLC25A6P4-201ENST00000586535 553 ntBASIC15.21■□□□□ 0.03
EPHA3P29320 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.21■□□□□ 0.03
EPHA3P29320 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
EPHA3P29320 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.21■□□□□ 0.03
EPHA3P29320 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
EPHA3P29320 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
EPHA3P29320 WASH3P-207ENST00000560956 1394 ntBASIC15.21■□□□□ 0.02
EPHA3P29320 FO538757.1-201ENST00000623083 1397 ntBASIC15.21■□□□□ 0.02
EPHA3P29320 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
EPHA3P29320 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms