Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.13□□□□□ -0.15
GDF1P27539 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 OR8S1-201ENST00000310194 1080 ntBASIC14.13□□□□□ -0.15
GDF1P27539 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.13□□□□□ -0.15
GDF1P27539 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 AC124283.3-201ENST00000570869 594 ntBASIC14.13□□□□□ -0.15
GDF1P27539 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.13□□□□□ -0.15
GDF1P27539 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.13□□□□□ -0.15
GDF1P27539 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 AC092127.1-201ENST00000567093 3455 ntBASIC14.13□□□□□ -0.15
GDF1P27539 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GDF1P27539 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
GDF1P27539 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
GDF1P27539 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDF1P27539 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.13□□□□□ -0.15
GDF1P27539 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.13□□□□□ -0.15
GDF1P27539 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.12□□□□□ -0.15
GDF1P27539 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GDF1P27539 CICP13-201ENST00000422015 2789 ntBASIC14.12□□□□□ -0.15
GDF1P27539 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.12□□□□□ -0.15
GDF1P27539 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GDF1P27539 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.12□□□□□ -0.15
GDF1P27539 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.12□□□□□ -0.15
GDF1P27539 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
GDF1P27539 TMEM14DP-201ENST00000422205 345 ntBASIC14.12□□□□□ -0.15
GDF1P27539 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
GDF1P27539 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.12□□□□□ -0.15
GDF1P27539 ENPP7P5-201ENST00000541031 1031 ntBASIC14.12□□□□□ -0.15
GDF1P27539 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.12□□□□□ -0.15
GDF1P27539 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GDF1P27539 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GDF1P27539 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
GDF1P27539 AC015936.2-201ENST00000593177 259 ntBASIC14.12□□□□□ -0.15
GDF1P27539 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.12□□□□□ -0.15
GDF1P27539 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.12□□□□□ -0.15
GDF1P27539 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
GDF1P27539 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
GDF1P27539 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
GDF1P27539 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.12□□□□□ -0.15
GDF1P27539 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDF1P27539 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.11□□□□□ -0.15
GDF1P27539 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 TNRC18P3-201ENST00000441896 2691 ntBASIC14.11□□□□□ -0.15
GDF1P27539 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 AC127383.1-201ENST00000444697 1800 ntBASIC14.11□□□□□ -0.15
GDF1P27539 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms