Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.93□□□□□ -0.02
LAMA1P25391 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
LAMA1P25391 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LAMA1P25391 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LAMA1P25391 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LAMA1P25391 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.92□□□□□ -0.02
LAMA1P25391 CHMP1AP1-201ENST00000445563 662 ntBASIC14.92□□□□□ -0.02
LAMA1P25391 RNMTL1P1-201ENST00000454103 560 ntBASIC14.92□□□□□ -0.02
LAMA1P25391 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.92□□□□□ -0.02
LAMA1P25391 AL358472.3-201ENST00000608147 415 ntBASIC14.92□□□□□ -0.02
LAMA1P25391 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LAMA1P25391 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 AL645937.2-201ENST00000396808 931 ntBASIC14.92□□□□□ -0.02
LAMA1P25391 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.92□□□□□ -0.02
LAMA1P25391 KRT18P66-201ENST00000452970 1269 ntBASIC14.92□□□□□ -0.02
LAMA1P25391 NDUFS6P1-201ENST00000485187 316 ntBASIC14.92□□□□□ -0.02
LAMA1P25391 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.92□□□□□ -0.02
LAMA1P25391 AP001065.2-201ENST00000617205 644 ntBASIC14.92□□□□□ -0.02
LAMA1P25391 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 LINC00554-201ENST00000564841 3011 ntBASIC14.92□□□□□ -0.02
LAMA1P25391 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.92□□□□□ -0.02
LAMA1P25391 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LAMA1P25391 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LAMA1P25391 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.91□□□□□ -0.02
LAMA1P25391 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.91□□□□□ -0.02
LAMA1P25391 AC007274.2-201ENST00000421675 662 ntBASIC14.91□□□□□ -0.02
LAMA1P25391 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.91□□□□□ -0.02
LAMA1P25391 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.91□□□□□ -0.02
LAMA1P25391 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LAMA1P25391 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LAMA1P25391 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LAMA1P25391 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.91□□□□□ -0.02
LAMA1P25391 FGFR3P1-201ENST00000449999 601 ntBASIC14.91□□□□□ -0.02
LAMA1P25391 AC104073.2-201ENST00000453737 312 ntBASIC14.91□□□□□ -0.02
LAMA1P25391 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.91□□□□□ -0.02
LAMA1P25391 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.91□□□□□ -0.02
LAMA1P25391 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.91□□□□□ -0.02
LAMA1P25391 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
LAMA1P25391 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms