Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.41□□□□□ -0.26
CCL1P22362 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CCL1P22362 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CCL1P22362 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL1P22362 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 AL121723.1-201ENST00000445194 1519 ntBASIC13.4□□□□□ -0.26
CCL1P22362 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CCL1P22362 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCL1P22362 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
CCL1P22362 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL1P22362 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL1P22362 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.4□□□□□ -0.26
CCL1P22362 HLA-J-203ENST00000494367 1087 ntBASIC13.4□□□□□ -0.26
CCL1P22362 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 AC010336.2-201ENST00000564226 506 ntBASIC13.4□□□□□ -0.26
CCL1P22362 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CCL1P22362 LINC01115-203ENST00000606068 577 ntBASIC13.4□□□□□ -0.26
CCL1P22362 SPDYE12P-201ENST00000618416 771 ntBASIC13.4□□□□□ -0.26
CCL1P22362 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 AF228730.6-201ENST00000641497 218 ntBASIC13.4□□□□□ -0.26
CCL1P22362 AC084121.3-201ENST00000641716 218 ntBASIC13.4□□□□□ -0.26
CCL1P22362 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 REXO1L4P-201ENST00000605109 1937 ntBASIC13.4□□□□□ -0.26
CCL1P22362 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.4□□□□□ -0.26
CCL1P22362 AC138969.3-201ENST00000546612 1459 ntBASIC13.4□□□□□ -0.26
CCL1P22362 AC138932.2-201ENST00000548268 1459 ntBASIC13.4□□□□□ -0.26
CCL1P22362 AC126755.4-201ENST00000549796 1459 ntBASIC13.4□□□□□ -0.26
CCL1P22362 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL1P22362 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CCL1P22362 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.4□□□□□ -0.26
CCL1P22362 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.4□□□□□ -0.26
CCL1P22362 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CCL1P22362 AP002414.2-201ENST00000591780 3365 ntBASIC13.4□□□□□ -0.26
CCL1P22362 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
CCL1P22362 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CCL1P22362 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
CCL1P22362 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL1P22362 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 LINC00552-201ENST00000625151 2579 ntBASIC13.39□□□□□ -0.27
CCL1P22362 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CCL1P22362 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.39□□□□□ -0.27
CCL1P22362 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms