Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
KCNA3P22001 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
KCNA3P22001 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
KCNA3P22001 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNA3P22001 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 MIR648-201ENST00000385046 94 ntBASIC18.77■□□□□ 0.6
KCNA3P22001 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.77■□□□□ 0.6
KCNA3P22001 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.77■□□□□ 0.6
KCNA3P22001 RCC2P8-201ENST00000502779 1035 ntBASIC18.77■□□□□ 0.6
KCNA3P22001 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.77■□□□□ 0.6
KCNA3P22001 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.77■□□□□ 0.6
KCNA3P22001 DUX4L47-201ENST00000566374 394 ntBASIC18.77■□□□□ 0.6
KCNA3P22001 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.77■□□□□ 0.6
KCNA3P22001 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.77■□□□□ 0.6
KCNA3P22001 AL136301.1-201ENST00000615830 422 ntBASIC18.77■□□□□ 0.6
KCNA3P22001 AC127024.7-201ENST00000625101 200 ntBASIC18.77■□□□□ 0.6
KCNA3P22001 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.77■□□□□ 0.6
KCNA3P22001 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KCNA3P22001 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
KCNA3P22001 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KCNA3P22001 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
KCNA3P22001 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNA3P22001 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KCNA3P22001 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
KCNA3P22001 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNA3P22001 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
KCNA3P22001 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.77■□□□□ 0.59
KCNA3P22001 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.77■□□□□ 0.59
KCNA3P22001 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNA3P22001 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNA3P22001 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.76■□□□□ 0.59
KCNA3P22001 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KCNA3P22001 AC055811.4-201ENST00000624039 1754 ntBASIC18.76■□□□□ 0.59
KCNA3P22001 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.76■□□□□ 0.59
KCNA3P22001 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.76■□□□□ 0.59
KCNA3P22001 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
KCNA3P22001 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNA3P22001 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
KCNA3P22001 MIR1227-201ENST00000408484 88 ntBASIC18.76■□□□□ 0.59
KCNA3P22001 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.76■□□□□ 0.59
KCNA3P22001 AC090857.1-201ENST00000527400 390 ntBASIC18.76■□□□□ 0.59
KCNA3P22001 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.76■□□□□ 0.59
KCNA3P22001 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.76■□□□□ 0.59
KCNA3P22001 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.76■□□□□ 0.59
KCNA3P22001 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNA3P22001 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNA3P22001 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KCNA3P22001 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNA3P22001 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KCNA3P22001 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 FKBP4P6-201ENST00000457486 1332 ntBASIC18.75■□□□□ 0.59
KCNA3P22001 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 E2F3P2-201ENST00000447755 1422 ntBASIC18.75■□□□□ 0.59
KCNA3P22001 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNA3P22001 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
KCNA3P22001 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNA3P22001 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNA3P22001 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNA3P22001 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
KCNA3P22001 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KCNA3P22001 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.75■□□□□ 0.59
KCNA3P22001 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.75■□□□□ 0.59
KCNA3P22001 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNA3P22001 RPL7P35-201ENST00000446943 740 ntBASIC18.75■□□□□ 0.59
KCNA3P22001 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNA3P22001 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNA3P22001 AC026803.1-201ENST00000569130 274 ntBASIC18.75■□□□□ 0.59
KCNA3P22001 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.75■□□□□ 0.59
KCNA3P22001 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.75■□□□□ 0.59
KCNA3P22001 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNA3P22001 NAP1L6-202ENST00000641404 1222 ntBASIC18.75■□□□□ 0.59
KCNA3P22001 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
KCNA3P22001 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KCNA3P22001 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.75■□□□□ 0.59
KCNA3P22001 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KCNA3P22001 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms