Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT4P19013 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.71■□□□□ 0.1
KRT4P19013 ACE3P-201ENST00000423435 1973 ntBASIC15.71■□□□□ 0.1
KRT4P19013 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT4P19013 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT4P19013 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT4P19013 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT4P19013 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT4P19013 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
KRT4P19013 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KRT4P19013 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
KRT4P19013 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
KRT4P19013 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT4P19013 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT4P19013 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KRT4P19013 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 FAM8A3P-201ENST00000427218 844 ntBASIC15.7■□□□□ 0.1
KRT4P19013 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 EEF1DP4-201ENST00000446006 880 ntBASIC15.7■□□□□ 0.1
KRT4P19013 AC093909.1-201ENST00000504731 1122 ntBASIC15.7■□□□□ 0.1
KRT4P19013 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT4P19013 HNRNPUP1-201ENST00000554987 333 ntBASIC15.7■□□□□ 0.1
KRT4P19013 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT4P19013 RARRES2P8-201ENST00000566335 367 ntBASIC15.7■□□□□ 0.1
KRT4P19013 AP002472.1-201ENST00000577490 586 ntBASIC15.7■□□□□ 0.1
KRT4P19013 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT4P19013 AC099522.2-201ENST00000607001 744 ntBASIC15.7■□□□□ 0.1
KRT4P19013 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT4P19013 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KRT4P19013 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KRT4P19013 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
KRT4P19013 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
KRT4P19013 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT4P19013 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.69■□□□□ 0.1
KRT4P19013 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KRT4P19013 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
KRT4P19013 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.69■□□□□ 0.1
KRT4P19013 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.69■□□□□ 0.1
KRT4P19013 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.69■□□□□ 0.1
KRT4P19013 AL139010.1-201ENST00000454878 894 ntBASIC15.69■□□□□ 0.1
KRT4P19013 AC074386.1-202ENST00000463561 864 ntBASIC15.69■□□□□ 0.1
KRT4P19013 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 Z83851.2-201ENST00000609564 659 ntBASIC15.69■□□□□ 0.1
KRT4P19013 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.69■□□□□ 0.1
KRT4P19013 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT4P19013 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT4P19013 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
KRT4P19013 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT4P19013 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT4P19013 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT4P19013 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms