Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNB2P17787 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNB2P17787 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNB2P17787 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNB2P17787 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHRNB2P17787 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNB2P17787 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNB2P17787 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNB2P17787 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHRNB2P17787 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNB2P17787 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNB2P17787 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHRNB2P17787 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 ACE3P-201ENST00000423435 1973 ntBASIC16.49■□□□□ 0.23
CHRNB2P17787 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNB2P17787 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNB2P17787 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNB2P17787 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.49■□□□□ 0.23
CHRNB2P17787 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNB2P17787 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHRNB2P17787 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
CHRNB2P17787 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHRNB2P17787 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNB2P17787 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNB2P17787 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNB2P17787 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.49■□□□□ 0.23
CHRNB2P17787 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNB2P17787 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNB2P17787 AC013726.1-201ENST00000563747 2285 ntBASIC16.49■□□□□ 0.23
CHRNB2P17787 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHRNB2P17787 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHRNB2P17787 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNB2P17787 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNB2P17787 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 LINC01101-201ENST00000622953 1884 ntBASIC16.48■□□□□ 0.23
CHRNB2P17787 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRNB2P17787 MRPS18AP1-201ENST00000414458 589 ntBASIC16.48■□□□□ 0.23
CHRNB2P17787 FAM8A3P-201ENST00000427218 844 ntBASIC16.48■□□□□ 0.23
CHRNB2P17787 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNB2P17787 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNB2P17787 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 AL158212.4-201ENST00000624062 1286 ntBASIC16.48■□□□□ 0.23
CHRNB2P17787 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 AL359258.3-201ENST00000622910 2331 ntBASIC16.48■□□□□ 0.23
CHRNB2P17787 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNB2P17787 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRNB2P17787 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRNB2P17787 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRNB2P17787 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CHRNB2P17787 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms