Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMPD1P17405 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.15■□□□□ 0.34
SMPD1P17405 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMPD1P17405 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.15■□□□□ 0.34
SMPD1P17405 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.15■□□□□ 0.34
SMPD1P17405 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.15■□□□□ 0.34
SMPD1P17405 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.15■□□□□ 0.34
SMPD1P17405 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.15■□□□□ 0.34
SMPD1P17405 AL391280.1-201ENST00000506969 1062 ntBASIC17.15■□□□□ 0.34
SMPD1P17405 AC022616.1-201ENST00000518688 554 ntBASIC17.15■□□□□ 0.34
SMPD1P17405 AC126915.1-201ENST00000522847 1038 ntBASIC17.15■□□□□ 0.34
SMPD1P17405 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.15■□□□□ 0.34
SMPD1P17405 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.15■□□□□ 0.34
SMPD1P17405 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.15■□□□□ 0.34
SMPD1P17405 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.15■□□□□ 0.34
SMPD1P17405 AC012183.1-201ENST00000625197 499 ntBASIC17.15■□□□□ 0.34
SMPD1P17405 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMPD1P17405 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SMPD1P17405 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMPD1P17405 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMPD1P17405 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SMPD1P17405 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.15■□□□□ 0.34
SMPD1P17405 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.15■□□□□ 0.34
SMPD1P17405 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.15■□□□□ 0.34
SMPD1P17405 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMPD1P17405 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.15■□□□□ 0.34
SMPD1P17405 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMPD1P17405 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SMPD1P17405 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMPD1P17405 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SMPD1P17405 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.14■□□□□ 0.33
SMPD1P17405 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.14■□□□□ 0.33
SMPD1P17405 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SMPD1P17405 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.14■□□□□ 0.33
SMPD1P17405 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.14■□□□□ 0.33
SMPD1P17405 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.14■□□□□ 0.33
SMPD1P17405 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.14■□□□□ 0.33
SMPD1P17405 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.14■□□□□ 0.33
SMPD1P17405 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.14■□□□□ 0.33
SMPD1P17405 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMPD1P17405 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMPD1P17405 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SMPD1P17405 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMPD1P17405 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 KRT8P4-201ENST00000509735 1454 ntBASIC17.13■□□□□ 0.33
SMPD1P17405 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.13■□□□□ 0.33
SMPD1P17405 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMPD1P17405 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.13■□□□□ 0.33
SMPD1P17405 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SMPD1P17405 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.13■□□□□ 0.33
SMPD1P17405 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.13■□□□□ 0.33
SMPD1P17405 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.13■□□□□ 0.33
SMPD1P17405 AC106872.11-201ENST00000605838 421 ntBASIC17.13■□□□□ 0.33
SMPD1P17405 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.13■□□□□ 0.33
SMPD1P17405 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.13■□□□□ 0.33
SMPD1P17405 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
SMPD1P17405 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.13■□□□□ 0.33
SMPD1P17405 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.13■□□□□ 0.33
SMPD1P17405 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SMPD1P17405 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SMPD1P17405 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMPD1P17405 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms