Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
HLA-DOBP13765 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HLA-DOBP13765 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DOBP13765 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HLA-DOBP13765 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HLA-DOBP13765 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DOBP13765 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14□□□□□ -0.17
HLA-DOBP13765 AC011270.2-201ENST00000624293 2550 ntBASIC14□□□□□ -0.17
HLA-DOBP13765 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DOBP13765 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DOBP13765 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 SDHAP3-202ENST00000515467 728 ntBASIC14□□□□□ -0.17
HLA-DOBP13765 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14□□□□□ -0.17
HLA-DOBP13765 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DOBP13765 AC009407.1-201ENST00000568958 598 ntBASIC14□□□□□ -0.17
HLA-DOBP13765 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14□□□□□ -0.17
HLA-DOBP13765 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14□□□□□ -0.17
HLA-DOBP13765 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 AC074044.1-201ENST00000609673 707 ntBASIC14□□□□□ -0.17
HLA-DOBP13765 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 HADH-212ENST00000638621 741 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14□□□□□ -0.17
HLA-DOBP13765 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14□□□□□ -0.17
HLA-DOBP13765 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 PMS2P2-201ENST00000425039 1128 ntBASIC13.99□□□□□ -0.17
HLA-DOBP13765 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 AC103702.1-201ENST00000548801 2630 ntBASIC13.99□□□□□ -0.17
HLA-DOBP13765 AC084364.1-201ENST00000551967 1556 ntBASIC13.99□□□□□ -0.17
HLA-DOBP13765 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms