Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RARAP10276 FO538757.1-201ENST00000623083 1397 ntBASIC16.38■□□□□ 0.21
RARAP10276 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.38■□□□□ 0.21
RARAP10276 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.38■□□□□ 0.21
RARAP10276 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.38■□□□□ 0.21
RARAP10276 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.38■□□□□ 0.21
RARAP10276 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.38■□□□□ 0.21
RARAP10276 AC051619.7-201ENST00000568314 623 ntBASIC16.38■□□□□ 0.21
RARAP10276 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 AC015911.4-201ENST00000588022 1070 ntBASIC16.38■□□□□ 0.21
RARAP10276 TEX28P1-201ENST00000613479 1221 ntBASIC16.38■□□□□ 0.21
RARAP10276 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 TEX28P2-201ENST00000617764 1221 ntBASIC16.38■□□□□ 0.21
RARAP10276 AC093028.1-201ENST00000622998 982 ntBASIC16.38■□□□□ 0.21
RARAP10276 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RARAP10276 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RARAP10276 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.38■□□□□ 0.21
RARAP10276 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 AC005089.1-201ENST00000619486 2241 ntBASIC16.37■□□□□ 0.21
RARAP10276 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RARAP10276 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RARAP10276 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 KLF2P3-201ENST00000451977 1087 ntBASIC16.37■□□□□ 0.21
RARAP10276 SERBP1P3-201ENST00000459980 809 ntBASIC16.37■□□□□ 0.21
RARAP10276 AC125807.1-201ENST00000483097 614 ntBASIC16.37■□□□□ 0.21
RARAP10276 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.37■□□□□ 0.21
RARAP10276 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.37■□□□□ 0.21
RARAP10276 AL512361.1-201ENST00000554200 418 ntBASIC16.37■□□□□ 0.21
RARAP10276 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.37■□□□□ 0.21
RARAP10276 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.37■□□□□ 0.21
RARAP10276 AC025048.3-201ENST00000590609 569 ntBASIC16.37■□□□□ 0.21
RARAP10276 AC005702.4-201ENST00000618393 416 ntBASIC16.37■□□□□ 0.21
RARAP10276 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RARAP10276 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.37■□□□□ 0.21
RARAP10276 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.37■□□□□ 0.21
RARAP10276 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RARAP10276 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RARAP10276 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms