Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.14□□□□□ -0.15
FREM3P0C091 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.14□□□□□ -0.15
FREM3P0C091 INTS4P2-202ENST00000614726 2019 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.14□□□□□ -0.15
FREM3P0C091 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
FREM3P0C091 AC134915.1-201ENST00000426461 574 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 RPL13P2-201ENST00000440687 659 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 AC093433.1-201ENST00000458048 571 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 FAM86LP-201ENST00000478302 853 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 AC017083.2-201ENST00000608069 979 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 CU634019.7-201ENST00000624153 1185 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 FP236241.2-201ENST00000624906 1185 ntBASIC14.14□□□□□ -0.15
FREM3P0C091 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
FREM3P0C091 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FREM3P0C091 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.13□□□□□ -0.15
FREM3P0C091 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
FREM3P0C091 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
FREM3P0C091 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FREM3P0C091 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.12□□□□□ -0.15
FREM3P0C091 AC124283.3-201ENST00000570869 594 ntBASIC14.12□□□□□ -0.15
FREM3P0C091 AC011270.2-201ENST00000624293 2550 ntBASIC14.12□□□□□ -0.15
FREM3P0C091 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 PDIA3P1-201ENST00000471856 1510 ntBASIC14.12□□□□□ -0.15
FREM3P0C091 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FREM3P0C091 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.12□□□□□ -0.15
FREM3P0C091 AC112492.5-201ENST00000421897 457 ntBASIC14.12□□□□□ -0.15
FREM3P0C091 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.12□□□□□ -0.15
FREM3P0C091 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.12□□□□□ -0.15
FREM3P0C091 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.12□□□□□ -0.15
FREM3P0C091 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms