Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 MIR4469-201ENST00000583919 79 ntBASIC13.58□□□□□ -0.24
CSF1P09603 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CSF1P09603 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CSF1P09603 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CSF1P09603 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.58□□□□□ -0.24
CSF1P09603 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CSF1P09603 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
CSF1P09603 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.58□□□□□ -0.24
CSF1P09603 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.58□□□□□ -0.24
CSF1P09603 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.58□□□□□ -0.24
CSF1P09603 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.58□□□□□ -0.24
CSF1P09603 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 AC023024.2-201ENST00000623561 1993 ntBASIC13.58□□□□□ -0.24
CSF1P09603 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CSF1P09603 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.58□□□□□ -0.24
CSF1P09603 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.58□□□□□ -0.24
CSF1P09603 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSF1P09603 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.58□□□□□ -0.24
CSF1P09603 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.57□□□□□ -0.24
CSF1P09603 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.57□□□□□ -0.24
CSF1P09603 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.57□□□□□ -0.24
CSF1P09603 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 ZBED1P1-201ENST00000502364 1930 ntBASIC13.57□□□□□ -0.24
CSF1P09603 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.57□□□□□ -0.24
CSF1P09603 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CSF1P09603 KRT18P2-201ENST00000447938 1258 ntBASIC13.57□□□□□ -0.24
CSF1P09603 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.57□□□□□ -0.24
CSF1P09603 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.57□□□□□ -0.24
CSF1P09603 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.57□□□□□ -0.24
CSF1P09603 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.57□□□□□ -0.24
CSF1P09603 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.57□□□□□ -0.24
CSF1P09603 AC134407.2-201ENST00000625089 1978 ntBASIC13.57□□□□□ -0.24
CSF1P09603 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CSF1P09603 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.57□□□□□ -0.24
CSF1P09603 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CSF1P09603 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.57□□□□□ -0.24
CSF1P09603 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CSF1P09603 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.57□□□□□ -0.24
CSF1P09603 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.57□□□□□ -0.24
CSF1P09603 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.57□□□□□ -0.24
CSF1P09603 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.57□□□□□ -0.24
CSF1P09603 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSF1P09603 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CSF1P09603 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CSF1P09603 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms