Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.64■□□□□ 0.57
CHGBP05060 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHGBP05060 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.63■□□□□ 0.57
CHGBP05060 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.63■□□□□ 0.57
CHGBP05060 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHGBP05060 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.63■□□□□ 0.57
CHGBP05060 AL157414.3-201ENST00000624276 1954 ntBASIC18.63■□□□□ 0.57
CHGBP05060 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHGBP05060 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 AC098614.1-201ENST00000368528 745 ntBASIC18.63■□□□□ 0.57
CHGBP05060 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CHGBP05060 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.63■□□□□ 0.57
CHGBP05060 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.63■□□□□ 0.57
CHGBP05060 AC008735.3-201ENST00000596646 500 ntBASIC18.63■□□□□ 0.57
CHGBP05060 AC133539.2-201ENST00000604757 467 ntBASIC18.63■□□□□ 0.57
CHGBP05060 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.63■□□□□ 0.57
CHGBP05060 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.63■□□□□ 0.57
CHGBP05060 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 AC126177.1-201ENST00000547829 2218 ntBASIC18.63■□□□□ 0.57
CHGBP05060 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHGBP05060 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHGBP05060 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHGBP05060 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 TMBIM7P-203ENST00000641617 1718 ntBASIC18.63■□□□□ 0.57
CHGBP05060 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.63■□□□□ 0.57
CHGBP05060 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHGBP05060 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC18.63■□□□□ 0.57
CHGBP05060 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHGBP05060 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHGBP05060 OR6D1P-203ENST00000641209 4860 ntBASIC18.62■□□□□ 0.57
CHGBP05060 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.62■□□□□ 0.57
CHGBP05060 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.62■□□□□ 0.57
CHGBP05060 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHGBP05060 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.62■□□□□ 0.57
CHGBP05060 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.62■□□□□ 0.57
CHGBP05060 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.62■□□□□ 0.57
CHGBP05060 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.62■□□□□ 0.57
CHGBP05060 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CHGBP05060 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.62■□□□□ 0.57
CHGBP05060 KRT8P44-201ENST00000441609 1350 ntBASIC18.62■□□□□ 0.57
CHGBP05060 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CHGBP05060 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.62■□□□□ 0.57
CHGBP05060 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 AL138799.1-201ENST00000448213 1675 ntBASIC18.62■□□□□ 0.57
CHGBP05060 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.62■□□□□ 0.57
CHGBP05060 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CHGBP05060 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 AL109954.1-202ENST00000564051 2148 ntBASIC18.62■□□□□ 0.57
CHGBP05060 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.62■□□□□ 0.57
CHGBP05060 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CHGBP05060 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHGBP05060 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHGBP05060 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.61■□□□□ 0.57
CHGBP05060 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.61■□□□□ 0.57
CHGBP05060 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 AC011270.2-201ENST00000624293 2550 ntBASIC18.61■□□□□ 0.57
CHGBP05060 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.61■□□□□ 0.57
CHGBP05060 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.61■□□□□ 0.57
CHGBP05060 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHGBP05060 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.61■□□□□ 0.57
CHGBP05060 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.61■□□□□ 0.57
CHGBP05060 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CHGBP05060 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.61■□□□□ 0.57
CHGBP05060 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHGBP05060 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.61■□□□□ 0.57
CHGBP05060 GIMAP3P-201ENST00000495150 836 ntBASIC18.61■□□□□ 0.57
CHGBP05060 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.61■□□□□ 0.57
CHGBP05060 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.61■□□□□ 0.57
CHGBP05060 MIR5189-201ENST00000577370 114 ntBASIC18.61■□□□□ 0.57
CHGBP05060 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms