Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CAPNS1P04632 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.54■□□□□ 0.08
CAPNS1P04632 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.54■□□□□ 0.08
CAPNS1P04632 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 PDIA3P1-201ENST00000471856 1510 ntBASIC15.54■□□□□ 0.08
CAPNS1P04632 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 SNX18-202ENST00000343017 3140 ntBASIC15.54■□□□□ 0.08
CAPNS1P04632 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CAPNS1P04632 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.54■□□□□ 0.08
CAPNS1P04632 GPAA1P2-201ENST00000417923 928 ntBASIC15.54■□□□□ 0.08
CAPNS1P04632 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 CSF2RBP1-201ENST00000447905 391 ntBASIC15.54■□□□□ 0.08
CAPNS1P04632 CTBP2P5-201ENST00000454986 1264 ntBASIC15.54■□□□□ 0.08
CAPNS1P04632 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.54■□□□□ 0.08
CAPNS1P04632 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.54■□□□□ 0.08
CAPNS1P04632 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.54■□□□□ 0.08
CAPNS1P04632 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.54■□□□□ 0.08
CAPNS1P04632 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.54■□□□□ 0.08
CAPNS1P04632 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.54■□□□□ 0.08
CAPNS1P04632 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CAPNS1P04632 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.53■□□□□ 0.08
CAPNS1P04632 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CAPNS1P04632 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 AC007191.1-201ENST00000623179 2995 ntBASIC15.53■□□□□ 0.08
CAPNS1P04632 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPNS1P04632 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
CAPNS1P04632 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPNS1P04632 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 BRWD1P1-201ENST00000401091 371 ntBASIC15.53■□□□□ 0.08
CAPNS1P04632 MIR1247-201ENST00000408206 136 ntBASIC15.53■□□□□ 0.08
CAPNS1P04632 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPNS1P04632 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.53■□□□□ 0.08
CAPNS1P04632 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.53■□□□□ 0.08
CAPNS1P04632 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
CAPNS1P04632 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CAPNS1P04632 AC106872.11-201ENST00000605838 421 ntBASIC15.53■□□□□ 0.08
CAPNS1P04632 AP001350.2-201ENST00000625104 1094 ntBASIC15.53■□□□□ 0.08
CAPNS1P04632 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.53■□□□□ 0.08
CAPNS1P04632 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.53■□□□□ 0.08
CAPNS1P04632 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.53■□□□□ 0.08
CAPNS1P04632 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CAPNS1P04632 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms