Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA1P02708 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA1P02708 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA1P02708 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 AL023775.1-201ENST00000454907 1746 ntBASIC16.79■□□□□ 0.28
CHRNA1P02708 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA1P02708 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA1P02708 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA1P02708 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CHRNA1P02708 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHRNA1P02708 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNA1P02708 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNA1P02708 AC004898.1-201ENST00000451057 766 ntBASIC16.79■□□□□ 0.28
CHRNA1P02708 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.79■□□□□ 0.28
CHRNA1P02708 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA1P02708 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA1P02708 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA1P02708 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CHRNA1P02708 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA1P02708 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 AC092127.1-201ENST00000567093 3455 ntBASIC16.79■□□□□ 0.28
CHRNA1P02708 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CHRNA1P02708 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.79■□□□□ 0.28
CHRNA1P02708 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHRNA1P02708 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CHRNA1P02708 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CHRNA1P02708 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CHRNA1P02708 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CHRNA1P02708 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CHRNA1P02708 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.78■□□□□ 0.28
CHRNA1P02708 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 MIR663B-201ENST00000408361 115 ntBASIC16.78■□□□□ 0.28
CHRNA1P02708 AKR7A2P1-201ENST00000460134 915 ntBASIC16.78■□□□□ 0.28
CHRNA1P02708 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.78■□□□□ 0.28
CHRNA1P02708 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.78■□□□□ 0.28
CHRNA1P02708 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.78■□□□□ 0.28
CHRNA1P02708 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.78■□□□□ 0.28
CHRNA1P02708 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.78■□□□□ 0.28
CHRNA1P02708 AL645728.2-202ENST00000641679 227 ntBASIC16.78■□□□□ 0.28
CHRNA1P02708 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 CYP2T1P-202ENST00000641596 2535 ntBASIC16.78■□□□□ 0.28
CHRNA1P02708 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CHRNA1P02708 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CHRNA1P02708 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CHRNA1P02708 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CHRNA1P02708 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CHRNA1P02708 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms