Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TIMP1P01033 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TIMP1P01033 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
TIMP1P01033 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TIMP1P01033 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMP1P01033 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TIMP1P01033 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TIMP1P01033 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.57■□□□□ 0.24
TIMP1P01033 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.57■□□□□ 0.24
TIMP1P01033 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.57■□□□□ 0.24
TIMP1P01033 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 RN7SL8P-201ENST00000461771 266 ntBASIC16.57■□□□□ 0.24
TIMP1P01033 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMP1P01033 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.57■□□□□ 0.24
TIMP1P01033 DUX4L47-201ENST00000566374 394 ntBASIC16.57■□□□□ 0.24
TIMP1P01033 MIR4754-201ENST00000582477 89 ntBASIC16.57■□□□□ 0.24
TIMP1P01033 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.57■□□□□ 0.24
TIMP1P01033 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 AC087045.2-201ENST00000606279 1003 ntBASIC16.57■□□□□ 0.24
TIMP1P01033 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TIMP1P01033 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.57■□□□□ 0.24
TIMP1P01033 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.57■□□□□ 0.24
TIMP1P01033 AL805961.1-201ENST00000642026 753 ntBASIC16.57■□□□□ 0.24
TIMP1P01033 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TIMP1P01033 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMP1P01033 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TIMP1P01033 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.56■□□□□ 0.24
TIMP1P01033 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 AC084364.1-201ENST00000551967 1556 ntBASIC16.56■□□□□ 0.24
TIMP1P01033 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TIMP1P01033 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TIMP1P01033 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.56■□□□□ 0.24
TIMP1P01033 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.56■□□□□ 0.24
TIMP1P01033 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.56■□□□□ 0.24
TIMP1P01033 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
TIMP1P01033 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.56■□□□□ 0.24
TIMP1P01033 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
TIMP1P01033 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.56■□□□□ 0.24
TIMP1P01033 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.56■□□□□ 0.24
TIMP1P01033 AC092171.5-201ENST00000608012 942 ntBASIC16.56■□□□□ 0.24
TIMP1P01033 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.56■□□□□ 0.24
TIMP1P01033 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.56■□□□□ 0.24
TIMP1P01033 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMP1P01033 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TIMP1P01033 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TIMP1P01033 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TIMP1P01033 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TIMP1P01033 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMP1P01033 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TIMP1P01033 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.55■□□□□ 0.24
TIMP1P01033 FAM58BP-201ENST00000439056 645 ntBASIC16.55■□□□□ 0.24
TIMP1P01033 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.55■□□□□ 0.24
TIMP1P01033 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.55■□□□□ 0.24
TIMP1P01033 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TIMP1P01033 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.55■□□□□ 0.24
TIMP1P01033 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms