Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST1O76090 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.28■□□□□ 0.2
BEST1O76090 TDH-203ENST00000531764 1110 ntBASIC16.28■□□□□ 0.2
BEST1O76090 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.28■□□□□ 0.2
BEST1O76090 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.28■□□□□ 0.2
BEST1O76090 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST1O76090 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST1O76090 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.28■□□□□ 0.2
BEST1O76090 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
BEST1O76090 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST1O76090 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST1O76090 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST1O76090 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BEST1O76090 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST1O76090 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST1O76090 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BEST1O76090 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.28■□□□□ 0.2
BEST1O76090 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST1O76090 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BEST1O76090 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST1O76090 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
BEST1O76090 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.27■□□□□ 0.2
BEST1O76090 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
BEST1O76090 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BEST1O76090 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
BEST1O76090 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST1O76090 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST1O76090 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST1O76090 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST1O76090 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.27■□□□□ 0.2
BEST1O76090 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.27■□□□□ 0.2
BEST1O76090 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.27■□□□□ 0.2
BEST1O76090 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.27■□□□□ 0.2
BEST1O76090 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.27■□□□□ 0.2
BEST1O76090 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST1O76090 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.19
BEST1O76090 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST1O76090 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST1O76090 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST1O76090 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
BEST1O76090 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
BEST1O76090 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST1O76090 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST1O76090 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST1O76090 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
BEST1O76090 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.27■□□□□ 0.19
BEST1O76090 AL359258.3-201ENST00000622910 2331 ntBASIC16.27■□□□□ 0.19
BEST1O76090 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BEST1O76090 AC073347.1-201ENST00000421633 2643 ntBASIC16.26■□□□□ 0.19
BEST1O76090 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 TMBIM7P-203ENST00000641617 1718 ntBASIC16.26■□□□□ 0.19
BEST1O76090 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
BEST1O76090 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 AC079776.1-201ENST00000401540 1152 ntBASIC16.26■□□□□ 0.19
BEST1O76090 RPL5P21-201ENST00000404620 815 ntBASIC16.26■□□□□ 0.19
BEST1O76090 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.26■□□□□ 0.19
BEST1O76090 SLC25A47P1-201ENST00000531577 414 ntBASIC16.26■□□□□ 0.19
BEST1O76090 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.26■□□□□ 0.19
BEST1O76090 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.26■□□□□ 0.19
BEST1O76090 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BEST1O76090 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 MST1L-201ENST00000442552 2185 ntBASIC16.26■□□□□ 0.19
BEST1O76090 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
BEST1O76090 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST1O76090 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms