Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 AL133267.1-201ENST00000398220 340 ntBASIC19.22■□□□□ 0.67
SMARCA5O60264 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.22■□□□□ 0.67
SMARCA5O60264 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCA5O60264 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 TSPY16P-201ENST00000449843 468 ntBASIC19.22■□□□□ 0.67
SMARCA5O60264 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.22■□□□□ 0.67
SMARCA5O60264 AC025181.2-201ENST00000606994 802 ntBASIC19.22■□□□□ 0.67
SMARCA5O60264 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
SMARCA5O60264 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCA5O60264 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 LINC00528-201ENST00000600723 2160 ntBASIC19.22■□□□□ 0.67
SMARCA5O60264 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.22■□□□□ 0.67
SMARCA5O60264 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCA5O60264 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCA5O60264 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCA5O60264 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCA5O60264 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 TCAF2P1-201ENST00000291129 2421 ntBASIC19.21■□□□□ 0.67
SMARCA5O60264 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SMARCA5O60264 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCA5O60264 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCA5O60264 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCA5O60264 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCA5O60264 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.21■□□□□ 0.67
SMARCA5O60264 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 KRT18P43-201ENST00000469825 1281 ntBASIC19.21■□□□□ 0.67
SMARCA5O60264 RNA5SP421-201ENST00000516864 134 ntBASIC19.21■□□□□ 0.67
SMARCA5O60264 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 SPCS2P1-201ENST00000561636 679 ntBASIC19.21■□□□□ 0.67
SMARCA5O60264 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SMARCA5O60264 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCA5O60264 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC19.21■□□□□ 0.67
SMARCA5O60264 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCA5O60264 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCA5O60264 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SMARCA5O60264 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCA5O60264 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 AC126365.1-201ENST00000578585 1514 ntBASIC19.2■□□□□ 0.66
SMARCA5O60264 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMARCA5O60264 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMARCA5O60264 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 SPTLC1P1-201ENST00000447199 261 ntBASIC19.2■□□□□ 0.66
SMARCA5O60264 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCA5O60264 MIR8072-201ENST00000614241 80 ntBASIC19.2■□□□□ 0.66
SMARCA5O60264 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCA5O60264 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCA5O60264 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCA5O60264 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms