Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EXTL3O43909 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.86■□□□□ 0.29
EXTL3O43909 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
EXTL3O43909 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
EXTL3O43909 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.86■□□□□ 0.29
EXTL3O43909 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
EXTL3O43909 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.86■□□□□ 0.29
EXTL3O43909 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.86■□□□□ 0.29
EXTL3O43909 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
EXTL3O43909 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.86■□□□□ 0.29
EXTL3O43909 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.86■□□□□ 0.29
EXTL3O43909 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.86■□□□□ 0.29
EXTL3O43909 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.86■□□□□ 0.29
EXTL3O43909 WASH4P-201ENST00000564273 1246 ntBASIC16.86■□□□□ 0.29
EXTL3O43909 CTBP2P3-201ENST00000585629 1255 ntBASIC16.86■□□□□ 0.29
EXTL3O43909 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.86■□□□□ 0.29
EXTL3O43909 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.86■□□□□ 0.29
EXTL3O43909 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.86■□□□□ 0.29
EXTL3O43909 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 AC046158.3-201ENST00000624947 2558 ntBASIC16.86■□□□□ 0.29
EXTL3O43909 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
EXTL3O43909 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.86■□□□□ 0.29
EXTL3O43909 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 INTS4P2-202ENST00000614726 2019 ntBASIC16.86■□□□□ 0.29
EXTL3O43909 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 AC126365.1-201ENST00000578585 1514 ntBASIC16.86■□□□□ 0.29
EXTL3O43909 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.86■□□□□ 0.29
EXTL3O43909 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
EXTL3O43909 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 AC013268.4-201ENST00000637413 2228 ntBASIC16.85■□□□□ 0.29
EXTL3O43909 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.85■□□□□ 0.29
EXTL3O43909 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 DGCR5-201ENST00000399539 862 ntBASIC16.85■□□□□ 0.29
EXTL3O43909 AC134915.1-201ENST00000426461 574 ntBASIC16.85■□□□□ 0.29
EXTL3O43909 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
EXTL3O43909 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
EXTL3O43909 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.85■□□□□ 0.29
EXTL3O43909 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
EXTL3O43909 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.85■□□□□ 0.29
EXTL3O43909 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EXTL3O43909 AL162727.3-201ENST00000635661 2787 ntBASIC16.84■□□□□ 0.29
EXTL3O43909 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EXTL3O43909 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.84■□□□□ 0.29
EXTL3O43909 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.84■□□□□ 0.29
EXTL3O43909 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.84■□□□□ 0.29
EXTL3O43909 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EXTL3O43909 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms