Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP2AO43633 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP2AO43633 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.52■□□□□ 0.4
CHMP2AO43633 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.52■□□□□ 0.4
CHMP2AO43633 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.52■□□□□ 0.4
CHMP2AO43633 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.52■□□□□ 0.4
CHMP2AO43633 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CHMP2AO43633 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 IGHV3-72-202ENST00000621503 303 ntBASIC17.52■□□□□ 0.4
CHMP2AO43633 AL033527.5-201ENST00000641382 801 ntBASIC17.52■□□□□ 0.4
CHMP2AO43633 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP2AO43633 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHMP2AO43633 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.52■□□□□ 0.4
CHMP2AO43633 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.52■□□□□ 0.39
CHMP2AO43633 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CHMP2AO43633 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CHMP2AO43633 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHMP2AO43633 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.52■□□□□ 0.39
CHMP2AO43633 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP2AO43633 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP2AO43633 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP2AO43633 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.51■□□□□ 0.39
CHMP2AO43633 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CHMP2AO43633 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHMP2AO43633 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 AC134915.1-201ENST00000426461 574 ntBASIC17.51■□□□□ 0.39
CHMP2AO43633 AL442647.2-201ENST00000429864 857 ntBASIC17.51■□□□□ 0.39
CHMP2AO43633 RN7SL837P-201ENST00000463010 287 ntBASIC17.51■□□□□ 0.39
CHMP2AO43633 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CHMP2AO43633 AC239800.4-201ENST00000603712 296 ntBASIC17.51■□□□□ 0.39
CHMP2AO43633 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.51■□□□□ 0.39
CHMP2AO43633 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP2AO43633 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHMP2AO43633 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP2AO43633 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.51■□□□□ 0.39
CHMP2AO43633 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CHMP2AO43633 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHMP2AO43633 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP2AO43633 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHMP2AO43633 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP2AO43633 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHMP2AO43633 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.5■□□□□ 0.39
CHMP2AO43633 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHMP2AO43633 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 AL512384.1-201ENST00000406683 331 ntBASIC17.5■□□□□ 0.39
CHMP2AO43633 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.5■□□□□ 0.39
CHMP2AO43633 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 AC011495.1-201ENST00000498085 584 ntBASIC17.5■□□□□ 0.39
CHMP2AO43633 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.5■□□□□ 0.39
CHMP2AO43633 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.5■□□□□ 0.39
CHMP2AO43633 AC133539.2-201ENST00000604757 467 ntBASIC17.5■□□□□ 0.39
CHMP2AO43633 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.5■□□□□ 0.39
CHMP2AO43633 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP2AO43633 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CHMP2AO43633 AC090616.6-203ENST00000579186 1945 ntBASIC17.5■□□□□ 0.39
CHMP2AO43633 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHMP2AO43633 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.5■□□□□ 0.39
CHMP2AO43633 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHMP2AO43633 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms