Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.91□□□□□ -0.02
CLOCKO15516 AC211486.1-202ENST00000416371 468 ntBASIC14.91□□□□□ -0.02
CLOCKO15516 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.91□□□□□ -0.02
CLOCKO15516 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.91□□□□□ -0.02
CLOCKO15516 FAM185BP-201ENST00000443595 716 ntBASIC14.91□□□□□ -0.02
CLOCKO15516 HCG4B-203ENST00000450128 991 ntBASIC14.91□□□□□ -0.02
CLOCKO15516 AC211476.1-201ENST00000503899 468 ntBASIC14.91□□□□□ -0.02
CLOCKO15516 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.91□□□□□ -0.02
CLOCKO15516 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CLOCKO15516 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 MIR4321-201ENST00000592276 80 ntBASIC14.91□□□□□ -0.02
CLOCKO15516 AC092865.6-201ENST00000642101 219 ntBASIC14.91□□□□□ -0.02
CLOCKO15516 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.91□□□□□ -0.02
CLOCKO15516 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.91□□□□□ -0.02
CLOCKO15516 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLOCKO15516 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
CLOCKO15516 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.9□□□□□ -0.02
CLOCKO15516 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 CXCL1P1-201ENST00000502804 216 ntBASIC14.9□□□□□ -0.02
CLOCKO15516 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.9□□□□□ -0.02
CLOCKO15516 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 AL513190.1-201ENST00000621254 727 ntBASIC14.9□□□□□ -0.02
CLOCKO15516 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 AC148477.4-201ENST00000613430 1793 ntBASIC14.9□□□□□ -0.02
CLOCKO15516 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
CLOCKO15516 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLOCKO15516 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLOCKO15516 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.9□□□□□ -0.02
CLOCKO15516 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms